Proportion of secondary bacterial infections among the SARS-COV-2 patients admitted in the selected health facilities in Mombasa and Nairobi counties in Kenya

Authors

  • Ali Abdi Adan Department of Community Health, School of Public Health, Thika, Kenya
  • Joseph Juma Department of Community Health, School of Public Health, Thika, Kenya
  • Oscar Donde Department of Environmental Science, Faculty of Environment and Resources Development, Egerton, Kenya
  • Jared Otieno Ogolla Department of Environmental Science, Faculty of Environment and Resources Development, Egerton, Kenya

DOI:

https://doi.org/10.18203/2394-6040.ijcmph20243269

Keywords:

SARS, SARS-COV-2, Secondary bacterial infections, Severe acute respiratory syndrome

Abstract

Background: There is still scarcity of evidence on proportion of secondary bacterial infections among SARS-COV-2 patients in Kenya. This study therefore sought to determine the proportion of secondary bacterial infections among SARS-COV-2 patients in ICUs in the selected health facilities in Mombasa and Nairobi Counties.

Methods: The retrospective cross-sectional sampled the records of 385 SARS-COV-2 patients admitted and administered antibiotics during treatment in the intensive care units (ICU) in the six health facilities that acted as isolation and treatment centers for SARS-COV-2 patients between 13th March 2020 and 31st December 2021. The research team reviewed the medical records of the SARS-COV-2 positive patients and extracted the patient demographic data, medical history, underlying co-morbidities, clinical symptoms, laboratory findings, management and treatment measures and antimicrobial susceptibility tests.

Results: 47.3% of the patients in the study had secondary bacterial infections. Significant majority of patients of these patients were smokers (n=158, 86.8%, p≤0.05), had very high fever at admission in the ICU (n=139, 76.4%, p=0.033) and were administered iron supplement during the hospital stay (n=125, 68.7%, p=0.027).

Conclusions: SARS-COV-2 patients who smoke, report high fever at admission in the ICU and given iron supplement during their stay in the health facility tend to have a high prevalence of secondary bacterial infections.

Metrics

Metrics Loading ...

References

Nedel W, Da Silveira F, Da Silva CF, Lisboa T. Bacterial infection in coronavirus disease 2019 patients: co-infection, super-infection and how it impacts on antimicrobial use. Curr Opin Crit Care. 2022;28(5):463.

Fu Y, Yang Q, Xu M, Kong H, Chen H, Fu Y, et al. Secondary bacterial infections in critical ill patients with coronavirus disease 2019. Open Forum Infect Dis. 2020;7(6).

Hoque MN, Akter S, Mishu ID, Islam MR, Rahman MS, Akhter M, et al. Microbial co-infections in COVID-19: associated microbiota and underlying mechanisms of pathogenesis. Microb Pathogen. 2021;156:104941.

Dessie ZG, Zewotir T. Mortality-related risk factors of COVID-19: a systematic review and meta-analysis of 42 studies and 423,117 patients. BMC Infect Dis. 2021:21(1):855.

Ho FK, Petermann-Rocha F, Gray SR, Jani BD, Katikireddi SV, Niedzwiedz CL, et al. Is older age associated with COVID-19 mortality in the absence of other risk factors? General population cohort study of 470,034 participants. PloS One. 2020;15(11):e0241824.

Li X, Xu S, Yu M, Wang K, Tao Y, Zhou Y, et al. Risk factors for severity and mortality in adult COVID-19 inpatients in Wuhan. J Allerg Clin Immunol. 2020;146(1):110-8.

De Bruyn A, Verellen S, Bruckers L, Geebelen L, Callebaut I, De Pauw I, et al. Secondary infection in COVID-19 critically ill patients: a retrospective single-center evaluation. BMC Infect Dis. 2022;22(1):207.

MacIntyre CR, Chughtai AA, Barnes M, Ridda I, Seale H, Toms R, et al. The role of pneumonia and secondary bacterial infection in fatal and serious outcomes of pandemic influenza a (H1N1) pdm09. BMC Infect Dis. 2018;18:1-20.

Rawson TM, Moore LS, Zhu N, Ranganathan N, Skolimowska K, Gilchrist M, et al. Bacterial and fungal coinfection in individuals with coronavirus: a rapid review to support COVID-19 antimicrobial prescribing. Clin Infect Dis. 2020;71(9):2459-68.

Baghdadi JD, Coffey KC, Adediran T, Goodman KE, Pineles L, Magder LS, et al. Antibiotic use and bacterial infection among inpatients in the first wave of COVID-19: a retrospective cohort study of 64,691 patients. Antimicrob Agents Chemother. 2021;65(11):10-128.

Feng Y, Ling Y, Bai T, Xie Y, Huang J, Li J, et al. COVID-19 with different severities: a multicenter study of clinical features. Am J Respir Crit Care Med. 2020;201(11):1380-8.

Shafran N, Shafran I, Ben-Zvi H, Sofer S, Sheena L, Krause I, et al. Secondary bacterial infection in COVID-19 patients is a stronger predictor for death compared to influenza patients. Sci Rep. 2021;11(1):12703.

Costa RL, Lamas CD, Simvoulidis LF, Espanha CA, Moreira LP, Bonancim RA, et al. Secondary infections in a cohort of patients with COVID-19 admitted to an intensive care unit: impact of gram-negative bacterial resistance. Revist Inst Med Trop São Paulo. 2022;64:e6.

Cusumano JA, Dupper AC, Malik Y, Gavioli EM, Banga J, Berbel Caban A, et al. Staphylococcus aureus bacteremia in patients infected with COVID-19: a case series. Open Forum Infect Dis. 2020;7(11):ofaa518.

Hu B, Guo H, Zhou P, Shi ZL. Characteristics of SARS-CoV-2 and COVID-19. Nat Rev Microbiol. 2020;19(3):141-54.

Wu F, Zhao S, Yu B, Chen YM, Wang W, Song ZG, et al. A new coronavirus associated with human respiratory disease in China. Nature. 2020;579(7798):265-9.

Zhu N, Zhang D, Wang W, Li X, Yang B, Song J, et al. A novel coronavirus from patients with pneumonia in China, 2019. N Engl J Med. 2020;382(8):727-33.

Collier DA. Age-related immune response heterogeneity to SARS-CoV-2 vaccine BNT162b2. Nature. 2021;596(7872):417-22.

Ahamad MM. A machine learning model to identify early stage symptoms of SARS-Cov-2 infected patients. Exp Syst Appl. 2020;160:113661.

Tabernero E, Ruiz LA, España PP, Méndez R, Serrano L, Santos B, et al. COVID-19 in young and middle-aged adults: predictors of poor outcome and clinical differences. Infection. 2022;50(1):179-89.

Mylene V, Peter J. The unrecognized threat of secondary bacterial infections with COVID-19. MBio. 2020:11(4).

Morris, DE, Cleary DW, Clarke SC. Secondary bacterial infections associated with influenza pandemics. Front Microbiol. 2017;8:1041.

Morens DM, Taubenberger JK, Fauci AS. Predominant role of bacterial pneumonia as a cause of death in pandemic influenza: implications for pandemic influenza preparedness. J Infect Dis. 2008;198(7):962-70.

Louria DB, Blumenfeld HL, Ellis JT, Kilbourne ED, Rogers DE. Studies on influenza in the pandemic of 1957-1958. II. Pulmonary complications of influenza. J Clin Invest. 1959:38(1):213-65.

Huang C, Wang Y, Li X, Ren L, Zhao J, Hu Y, et al. Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China. Lancet. 2020;395(10223):497-506.

Martinez-Guerra BA, Gonzalez-Lara MF, de-Leon-Cividanes NA, Tamez-Torres KM, Roman-Montes CM, Rajme-Lopez S, et al. Antimicrobial resistance patterns and antibiotic use during hospital conversion in the COVID-19 pandemic. Antibiotics. 2021;10(2):182.

Pourajam S, Kalantari E, Talebzadeh H, Mellali H, Sami R, Soltaninejad F, et al. Secondary bacterial infection and clinical characteristics in patients with COVID-19 admitted to two intensive care units of an academic hospital in Iran during the first wave of the pandemic. Front Cell Infect Microbiol. 2022;12:784130.

Juhi B, Donald RD, David AS. Tobacco use increases susceptibility to bacterial infection. Tob Induc Dis. 2008;4(1):12.

Downloads

Published

2024-10-29

How to Cite

Adan, A. A., Juma, J., Donde, O., & Ogolla, J. O. (2024). Proportion of secondary bacterial infections among the SARS-COV-2 patients admitted in the selected health facilities in Mombasa and Nairobi counties in Kenya. International Journal Of Community Medicine And Public Health, 11(11), 4162–4167. https://doi.org/10.18203/2394-6040.ijcmph20243269

Issue

Section

Original Research Articles